ProteoRed - Instituto Nacional de Protemica Jul 30th, 2010 
ProteoRed Multi-centric Experiment 6 page


Samples - PME 5

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Samples:

 
  • Each participant laboratory will receive two protein mixture samples, labeled A and B, containing each 100 µg of total protein.

 
  • Samples are in solution, in 20mM Tris.HCl, 50 mM NaCl, and are sent frozen.
 
  • Concentration of both samples is 6.6 mg/mL
 
  • New samples were sent on January 26th: Samples are identical to the previous ones (100 micrograms of each protein mixture A and B), except that this time they are dissolved in 6M Urea /1% CHAPS, at 6 micrograms/microliter concentration.
                   
  Samples contain:
     
    A mixture of around 150 E. Coli proteins (identical in each sample). This mixture has been prepared by fractionation of the cytoplasmatic proteome of E.Coli. It contains soluble proteins, of a wide range of pI and Mw.
     
    Four spiked mammalian proteins:
     
   
  • CYC_HORSE (Cytochrome C, Mw 12362), added at the ~ 1 pmol/ 1 mg total protein level.
   
  • MYG_HORSE (Apomyoglobin, Mw 16952), at ~ 200 fmol / 1 mg total protein
   
  • ALDOA_RABIT (Aldolase, Mw 39212), at ~ 25 fmol / 1 mg total protein
   
  • ALBU_BOVIN (Serum albumin, Mw 66430), at ~ 1 fmol / 1 mg total protein
     
    These four proteins have been spiked in different amounts in samples A and B, with ratios ranging from 1.5:1 to 5:1 between the two samples.
                   
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